MIT-LCP/mimic-code resource
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases observed · 2026-08-28
Health v2 · maintenance only
79/100
- Activity 99
- Release rhythm 40
- Longevity 100
How is this computed?
round(0.45*activity + 0.35*rhythm + 0.20*longevity); archived -> min(score, 10) — computed 2026-09-03. Adoption (stars, forks) is never an input.
- gap_med: 0
- age_days: 4019
- days_rel: 497
- days_push: 8
- n_releases_24m: 2
Adoption not part of the score
3355 stars · 1729 forks observed · 2026-08-28
What it is AI-extracted, prompt v1, taxonomy v1, 2026-08-29, confidence not recorded
A community-maintained repository of code for building, loading, and analyzing the MIMIC family of critical care databases (MIMIC-III, MIMIC-IV, MIMIC-IV-Note, MIMIC-IV-ED, MIMIC-CXR). It includes database build scripts, SQL concepts for derived clinical variables, and Jupyter notebook tutorials.
Use cases
- build a local postgres database from mimic-iv csv files
- query mimic-iv on bigquery for icu research
- extract sepsis or mortality concepts from mimic-iii
- load mimic-cxr dicom images and radiology reports
- link patients across mimic-iv modules for analysis
- learn how to query critical care ehr data
- reproduce clinical research analyses on mimic data
When to choose
- you have credentialed PhysioNet access to MIMIC data and need build scripts or derived concepts
- you want community-vetted SQL for clinical variables like sepsis, AKI, or ventilation
- you are starting critical care or clinical NLP research with MIMIC-IV
When to avoid
- you need a general-purpose EHR analytics tool not tied to the MIMIC schema
- you lack PhysioNet credentialing and a signed data use agreement
- you need a maintained software library with an API rather than SQL scripts and notebooks
Facets
dataset · maturity active
database etl data-science documentation healthcare data-science databases tutorials python cloud self-hosted cross-platform mimic-iii mimic-iv critical-care icu physionet electronic-health-records bigquery postgresql clinical-research jupyter-notebooks reproducibility
10 sources
- readme: https://github.com/MIT-LCP/mimic-code · fetched 2026-08-28 · 120bfd092c32
- homepage: https://mimic.mit.edu · fetched 2026-08-29 · 80afa7ebc041
- site_page: https://mimic.mit.edu/docs/help · fetched 2026-08-29 · bcd8531d6b8a
- site_page: https://mimic.mit.edu/docs/faq · fetched 2026-08-29 · 6dd6da39d5bd
- site_page: https://mimic.mit.edu/docs/faq/how-to-get-access.html · fetched 2026-08-29 · 8c2a712dc6aa
- site_page: https://mimic.mit.edu/docs/faq/data.html · fetched 2026-08-29 · 33a394678b81
- site_page: https://mimic.mit.edu/docs/about · fetched 2026-08-29 · b932272f52d1
- site_page: https://mimic.mit.edu/docs/about/sources · fetched 2026-08-29 · aab1e49f946e
- site_page: https://mimic.mit.edu/docs/about/sources/metavision.html · fetched 2026-08-29 · cd675afb29a5
- site_page: https://mimic.mit.edu/docs/about/sources/carevue.html · fetched 2026-08-29 · 6f35212bd448
Member repositories
| Repository | Role | Health v2 |
|---|---|---|
| MIT-LCP/mimic-code | main | 79 |
For agents
markdown · JSON · MCP: product_card(name="MIT-LCP/mimic-code")
Data as of 2026-08-30T08:39:29.467469+00:00 · Report a problem