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quinlan-lab/applied-computational-genomics resource

Applied Computational Genomics Course at UU: Spring 2020 observed · 2026-08-28

github.com/quinlan-lab/applied-computational-genomics · HTML · CC-BY-SA-4.0 (other) observed · 2026-08-28

Health v2 · maintenance only

32/100

  • Activity 0
  • Release rhythm 35
  • Longevity 100

Flags: no_releases

How is this computed?

round(0.45*activity + 0.35*rhythm + 0.20*longevity); archived -> min(score, 10) — computed 2026-09-03. Adoption (stars, forks) is never an input.

  • gap_med: n/a
  • age_days: 3677
  • days_rel: n/a
  • days_push: 880
  • n_releases_24m: 0

Full methodology

Adoption not part of the score

1131 stars · 247 forks observed · 2026-08-28

What it is AI-extracted, prompt v1, taxonomy v1, 2026-08-30, confidence not recorded

Course materials for the Applied Computational Genomics course at the University of Utah, including lecture slides, videos, and homework assignments. It teaches fundamental concepts and analysis strategies for genomic sequencing data such as alignment, variant calling, ChIP-seq, and RNA-seq.

Use cases

  • learn computational genomics from scratch
  • self-study bioinformatics data analysis
  • find lecture slides on DNA sequencing analysis
  • learn Unix for genomics research
  • understand ChIP-seq and RNA-seq workflows
  • teach a university genomics analysis course

When to choose

  • you want a structured, university-level introduction to computational genomics
  • you need free lecture slides and videos covering sequencing data analysis
  • you are a student or researcher grounding yourself in genomics data formats and tools

When to avoid

  • you need production bioinformatics software rather than course materials
  • you want interactive hands-on coding exercises with automated feedback
  • you need advanced specialized topics beyond introductory sequencing analysis

Facets

learning-resource · maturity active

documentation bioinformatics education tutorials cli cross-platform genomics computational-biology course-materials dna-sequencing bioinformatics-education lecture-slides

1 source

Member repositories

RepositoryRoleHealth v2
quinlan-lab/applied-computational-genomicsmain32

For agents

markdown · JSON · MCP: product_card(name="quinlan-lab/applied-computational-genomics")

Data as of 2026-08-30T08:39:29.467469+00:00 · Report a problem