Open-source healthcare software

223 open-source libraries, tools and applications tagged healthcare, ranked by how closely healthcare is their primary purpose, then by adoption and maintenance health. Each entry links to a page with sources, use cases and when to choose or avoid it.

223 products, primary matches first, then adoption-weighted; health v2 shown.

Product	Health v2	Stars	Maturity
endurain-project/endurain Endurain is a self-hosted fitness tracking service, similar to Strava, that gives users full control over their activity, gear, and health …	90	2264	active
AlphaGenome A Python SDK providing programmatic access to Google DeepMind's AlphaGenome model, which predicts genomic regulatory outputs such as gene e…	89	2192	active
dreeveapp/dreeve Dreeve is a self-hosted, open-source dashboard for visualizing and analyzing sports and fitness data, formerly known as 'Statistics for Str…	84	2143	active
chaidiscovery/chai-lab Chai-1 is a state-of-the-art multi-modal foundation model for biomolecular structure prediction, handling proteins, small molecules, DNA, R…	62	2001	active
ferrocene/ferrocene Ferrocene is a safety-critical Rust toolchain, a downstream fork of the official Rust compiler, qualified for use in safety- and mission-cr…	73	1688	active
DeepGraphLearning/torchdrug TorchDrug is a PyTorch-based machine learning library for drug discovery, covering graph neural networks, deep generative models, and reinf…	23	1589	active
cossacklabs/acra Acra is a database security suite that provides field-level encryption, searchable encryption, tokenization, data masking, SQL firewalling,…	54	1493	active
stenolabs/stenoai Steno is a privacy-first desktop AI notepad and meeting notetaker that records, transcribes, summarizes, and lets you query meetings entire…	85	1338	active
stardist/stardist StarDist is a Python library for object detection and instance segmentation in 2D and 3D microscopy images using star-convex shapes, built …	54	1271	stable
matthiasn/lotti Lotti is a private, local-first logbook app for journaling, task management, time tracking, habits, and health data, with a staff of person…	99	1200	active
MIC-DKFZ/batchgenerators A Python framework for data augmentation of 2D and 3D images, developed by the German Cancer Research Center for medical image classificati…	68	1173	stable
CellProfiler CellProfiler is a free, open-source desktop application for quantitative analysis of biological images, letting biologists build modular im…	67	1137	active
PaddlePaddle/PaddleHelix PaddleHelix is a bio-computing platform built on PaddlePaddle featuring large-scale representation learning and multi-task deep learning fo…	53	1120	active
linyiLYi/pose-monitor An Android app that uses the camera to detect bad sitting posture in real time and gives voice reminders. It runs MoveNet pose estimation p…	23	2624	maintenance
bigmb/Unet-Segmentation-Pytorch-Nest-of-Unets A PyTorch implementation of several U-Net variants for image segmentation, including UNet, R2U-Net, Attention U-Net, Attention R2U-Net, and…	32	2255	maintenance
cpfair/tapiriik tapiriik is an open-source web service that synchronizes fitness activities between services like Garmin Connect, Strava, Runkeeper, Traini…	32	1739	maintenance
chandrikadeb7/Face-Mask-Detection A face mask detection system built with OpenCV and TensorFlow/Keras that uses deep learning (SSD MobileNetV2) to detect whether people are …	23	1605	maintenance
OpnTec/bodyapps-viz A web-based 3D human body visualizer component for the BodyApps project, built with Three.js. It renders male, female, and kids body models…	32	1525	maintenance
orobix/retina-unet A Python implementation of a U-Net convolutional neural network for segmenting blood vessels in retina fundus images. It performs binary pi…	32	1355	maintenance
markwk/qs_ledger A personal data aggregator and analysis toolkit for quantified self enthusiasts, written in Python and distributed as Jupyter Notebooks. It…	32	1078	maintenance
4uiiurz1/pytorch-nested-unet A PyTorch implementation of the UNet++ (Nested U-Net) architecture for image segmentation, based on the paper 'UNet++: A Nested U-Net Archi…	32	1051	maintenance
LeeJunHyun/Image_Segmentation A PyTorch implementation of four U-Net variants for image segmentation: U-Net, R2U-Net, Attention U-Net, and Attention R2U-Net. It includes…	32	3102	abandoned
github/covid19-dashboard A static website dashboard that displays up-to-date COVID-19 statistics, built with fastpages and automatically updated via GitHub Actions …	10	1623	abandoned