cBioPortal/cbioportal
cBioPortal for Cancer Genomics observed · 2026-09-03
Health v2 · maintenance only
97/100
- Activity 100
- Release rhythm 92
- Longevity 100
How is this computed?
round(0.45*activity + 0.35*rhythm + 0.20*longevity); archived -> min(score, 10) — computed 2026-09-03. Adoption (stars, forks) is never an input.
- gap_med: 28
- age_days: 4186
- days_rel: 55
- days_push: 0
- n_releases_24m: 14
Adoption not part of the score
1032 stars · 865 forks observed · 2026-09-03
What it is AI-extracted, prompt v1, taxonomy v1, 2026-08-30, confidence not recorded
cBioPortal is an open-source web application for visualization, analysis, and download of large-scale cancer genomics datasets. This repository contains the Java backend, with a separate frontend repo, deployable via Docker and backed by ClickHouse (v7) or MySQL (v6).
Use cases
- explore and visualize large-scale cancer genomics data
- host a private instance of a cancer genomics portal
- analyze genomic alterations across tumor samples
- download cancer genomics datasets for research
- build precision medicine tools on top of genomics data
When to choose
- you need a proven, self-hostable platform for exploring cancer genomics data
- you want interactive visualization and analysis of mutation, CNA, and clinical data
- you are a research lab or hospital deploying a private genomics portal
When to avoid
- you need general-purpose bioinformatics pipelines rather than data exploration
- you want a lightweight library to embed in another app rather than a full web application
- you rely on v6 MySQL workflows and need active feature development
Facets
application · maturity active
data-visualization analytics search-engine api-framework http-server bioinformatics healthcare data-visualization analytics self-hosted jvm self-hosted cross-platform cancer-genomics precision-medicine genomics clickhouse scientific-software research docker web-server
1 source
- readme: https://github.com/cBioPortal/cbioportal · fetched 2026-09-03 · 4bc8d31345c8
Member repositories
| Repository | Role | Health v2 |
|---|---|---|
| cBioPortal/cbioportal | main | 97 |
For agents
markdown · JSON · MCP: product_card(name="cBioPortal/cbioportal")
Data as of 2026-08-30T08:39:29.467469+00:00 · Report a problem